Learned a few things about xdg and mimetype registration in the last week that could be helpful to have condensed in a single place.

No Need to Ship a Mailcap Mime File

If you already ship a .desktop file (that is what ends up in /usr/share/applications/) which has a MimeType declared, there is no need to also ship a mailcap file (that is what ends up in /usr/lib/mime/packages/). Some triggers will do the conversion work for you. See also Debian Policy 4.9.

Reverse DNS Naming Convention for .desktop Files

Seems to be a closely guarded secret, maybe mainly known inside the Gnome world, but it's in the spec. Also not very widely known inside Debian if I look at my local system as not very representative sample.

Your hicolor Theme App Icon can be a Mime Type Icon as Well

In case you didn't know the hicolor icon theme is the default fallback theme. Many of us already install application icons e.g. in /usr/share/icons/hicolor/48x48/apps/ which is used in conjunction with the Icon field in the .desktop file to locate the application icon. Now the next step, and there it seems quite of few us miss out, is to create a symlink to also provide a mime type icon, so it's displayed in graphical file managers for the application data files. The schema here is simple: Take the MimeType e.g. application/x-vymand replace the / with a - and use that as file name in e.g. /usr/share/icons/hicolor/48x48/mimetypes/. In the vym case that is /usr/share/icons/hicolor/48x48/mimetypes/application-x-vym.png. If you have one use a scalable .svg file instead of .png.

This seems to be an area where Debian lacks a bit of tooling to automatically convert application icons to all the different sizes and install it in all the appropriate places. What is already there is a trigger to run gtk-update-icon-cache when you install new icons into one of the icon theme folder so they're picked up.

No Priority or Order in .desktop Files

Likely something that hapens on all my fresh installations: Libreoffice is installed and xdg-open starts to open pdf files with Libreoffice instead of evince. Now I've to figure out again to run xdg-mime default org.gnome.Evince.desktop application/pdf to change that (at least for my user). Background here is that the desktop file spec explicitly mandates "Priority for applications is handled external to the .desktop files.". That's why we got in addition to all of that mimeapps.list files. And now, after running the xdg-mime command from above, we've a ~/.config/mimeapps.list defining

[Default Applications]
application/pdf=org.gnome.Evince.desktop

Debian as whole seems to be not very keen on shipping something like a sensible default mimeapps.list outside of desktop environment specific ones. A quick search gave me just

$ apt-file search mimeapps.list
cinnamon-desktop-data: /usr/share/applications/x-cinnamon-mimeapps.list
gdm3: /usr/share/gdm/greeter/applications/mimeapps.list
gnome-session-common: /usr/share/applications/gnome-mimeapps.list
plasma-workspace: /usr/share/applications/kde-mimeapps.list
sxmo-utils: /usr/share/applications/mimeapps.list
sxmo-utils: /usr/share/sxmo/xdg/mimeapps.list

While it's a bit anoying to run into that pdf vs Libreoffice thing every now and then, it's maybe better to not have long controversial threads about default pdf viewer, like the ones we already had about the default MTA choices. And while we're at it: everyone using Libreoffice should give a virtual hug to rene@ for taming that beast since 2010 and OpenOffice.org before.